Tools & data

Harmonic Degree ↗

Code for assessing network coarse-graining quality via harmonic morphisms and dynamical invariants.

From Harmonic morphisms and dynamical invariants in network renormalization

RUNESNetwork Foundations

Higher-Order Laplacian Renormalization ↗

Python code to perform higher-order Laplacian renormalization of higher-order networks.

From Higher-order Laplacian Renormalization

Network Foundations

Modelling TUS ↗

Python code to reproduce the computational model of transcranial ultrasound stimulation (TUS) at different stimulation intensities.

From Understanding the high-order network plasticity mechanisms of ultrasound neuromodulation

Topological NeuroscienceNetwork FoundationsRUNES

Social-Asocial Learning ↗

Code to reproduce the network analysis from 'Social and asocial learning in zebrafish'.

XGI ↗

CompleX Group Interactions: a Python package for higher-order networks, with hypergraphs and simplicial complexes.

From XGI: A Python package for higher-order interaction networks

Network Foundations

Sperm Whale Foraging Tactics ↗

Code and derived data for the multiscale analysis of sperm-whale foraging: persistent search paths and flexible prey-capture tactics.

From Sperm whale foraging combines persistent search with flexible prey-capture tactics

Project CETIRUNES

Sperm Whale Birth Analysis ↗

Tracking and alignment of whales in drone footage of a sperm whale birth, from segmentation masks to orientation and position features.

From Cooperation by non-kin during birth underpins sperm whale social complexity

Project CETIRUNES

Social Learning in Sperm Whales ↗

Code for the network analysis of social learning across symbolic cultural barriers in sperm whale clans.

From Evidence of social learning across symbolic cultural barriers in sperm whales

Project CETI

Holes ↗

A Python module for detecting, analysing and visualising persistent homological features of complex networks.

From Homological scaffolds of brain functional networks

Topological Neuroscience

Simplicial Activity Driven Model ↗

Python implementation for the Simplicial Activity Driven (SAD) model.

Simplex2Vec ↗

Simplex2Vec: representation learning for simplicial complexes.

RHOSTS ↗

Code for 'Higher-order structure of multivariate time series' (Nature Physics).

From Higher-order organization of multivariate time series

Network Foundations

Brain HORS ↗

Code for replicating analyses of Nature Communications paper on higher-order connectomics of human brain function.

From Higher-order connectomics of human brain function reveals local topological signatures of task decoding, individual identification, and behavior

Network FoundationsTopological Neuroscience

ALCOREM ↗

Code for 'Algorithmic complexity of multiplex networks' (PRX).